BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H01LP1|AL426594
(829 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig963 1635 0.0
>3x_Contig963
Length = 4018
Score = 1635 bits (824), Expect = 0.0
Identities = 826/827 (99%)
Strand = Plus / Minus
Query: 3 cgttgcatatgaaagaatataatttttatcctctctcagaaattcgtgaagaagggcaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 cgttgcatatgaaagaatataatttttatcctctctcagaaattcgtgaagaagggcaaa 2522
Query: 63 agaggcctaatactcaacctattatgcccgctataatccgcgttacgtccgatgaataag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 agaggcctaatactcaacctattatgcccgctataatccgcgttacgtccgatgaataag 2462
Query: 123 ataatagcatcggacgtnaggcaaaaatatcagatttgtaccctttcagtttttcctcca 182
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ataatagcatcggacgtaaggcaaaaatatcagatttgtaccctttcagtttttcctcca 2402
Query: 183 acattggtttggcaatctgctaactctaaatcgaattttacaaggcatcttagttttgca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 acattggtttggcaatctgctaactctaaatcgaattttacaaggcatcttagttttgca 2342
Query: 243 tgctggcaaagtcaacaaataatccgccttttgaacttgcacgaacattctcttgcgggt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 tgctggcaaagtcaacaaataatccgccttttgaacttgcacgaacattctcttgcgggt 2282
Query: 303 acaaatggcgtgatttcattacataaaccgaataatgtctaagaaagcccatcaggactg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 acaaatggcgtgatttcattacataaaccgaataatgtctaagaaagcccatcaggactg 2222
Query: 363 atgccaagctaactgcagcacatgtgcaatatatttctcagtgccaagtgacaggaaaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 atgccaagctaactgcagcacatgtgcaatatatttctcagtgccaagtgacaggaaaga 2162
Query: 423 atttatgatggagggtcctattgctattgaaatattgtagaatattttttcaaactaata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 atttatgatggagggtcctattgctattgaaatattgtagaatattttttcaaactaata 2102
Query: 483 gcgacatactttccatagcggaatatgtaaattcttagttgagcaattgatttaattcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gcgacatactttccatagcggaatatgtaaattcttagttgagcaattgatttaattcaa 2042
Query: 543 atcataacctaatatgcaaccaacatatattgtttgttacctaaaaaattgattcggaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 atcataacctaatatgcaaccaacatatattgtttgttacctaaaaaattgattcggaaa 1982
Query: 603 aacaattagtaaagccgtgcagtttgcttcaaagagcatcggccacctacgtcgtgcatt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 aacaattagtaaagccgtgcagtttgcttcaaagagcatcggccacctacgtcgtgcatt 1922
Query: 663 tttgagtagaattgaggccccctttcggtagttatgaataactatcgaatagagttgtat 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tttgagtagaattgaggccccctttcggtagttatgaataactatcgaatagagttgtat 1862
Query: 723 agctctgggtaagatatttttccgtcgtcaagtggtttagaagaagcgataacaaatcag 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agctctgggtaagatatttttccgtcgtcaagtggtttagaagaagcgataacaaatcag 1802
Query: 783 tctaaactgtttggatctaacggcgagagttgcaagtagtccctgat 829
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tctaaactgtttggatctaacggcgagagttgcaagtagtccctgat 1755
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5729
Number of Sequences: 1807
Number of extensions: 5729
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 829
length of database: 10,358,551
effective HSP length: 16
effective length of query: 813
effective length of database: 10,329,639
effective search space: 8397996507
effective search space used: 8397996507
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)